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| I | Shakter Karaganda | - | Debreceni VSC | 1:1 (0:0) | ||
| V | Debreceni VSC | - | Shakter Karaganda | 1:0 (1:0) | ||
| I: 17.07.2008 14:00 | V: 31.07.2008 20:00 | Campeones: Debreceni VSC | ||||
| I | FC Ararat | - | AC Bellinzona | 0:1 (0:1) | ||
| V | AC Bellinzona | - | FC Ararat | 3:1 (3:0) | ||
| I: 17.07.2008 16:00 | V: 31.07.2008 20:15 | Campeones: AC Bellinzona | ||||
| I | Tobyl Kostanay | - | Austria Wien | 1:0 (0:0) | ||
| V | Austria Wien | - | Tobyl Kostanay | 2:0 (1:0) | ||
| I: 17.07.2008 16:00 | V: 31.07.2008 20:30 | Campeones: Austria Wien | ||||
| I | MTZ-Ripo | - | MŠK Žilina | 2:2 (1:1) | ||
| V | MŠK Žilina | - | MTZ-Ripo | 1:0 (0:0) | ||
| I: 17.07.2008 17:00 | V: 31.07.2008 19:30 | Campeones: MŠK Žilina | ||||
| I | JFK Olimps/RFS | - | St Patrick's Athletic | 0:1 (0:0) | ||
| V | St Patrick's Athletic | - | JFK Olimps/RFS | 2:0 (1:0) | ||
| I: 17.07.2008 17:00 | V: 31.07.2008 20:45 | Campeones: St Patrick's Athletic | ||||
| I | FC Honka | - | ÍA Akranes | 3:0 (2:0) | ||
| V | ÍA Akranes | - | FC Honka | 2:1 (1:0) | ||
| I: 17.07.2008 17:30 | V: 31.07.2008 20:00 | Campeones: FC Honka | ||||
| I | FC TVMK | - | FC Nordsjælland | 0:3 (0:1) | ||
| V | FC Nordsjælland | - | FC TVMK | 5:0 (1:0) | ||
| I: 17.07.2008 17:30 | V: 29.07.2008 19:00 | Campeones: FC Nordsjælland | ||||
| I | FK Pelister | - | APOEL Nikosia | 0:0 (0:0) | ||
| V | APOEL Nikosia | - | FK Pelister | 1:0 (0:0) | ||
| I: 17.07.2008 18:00 | V: 31.07.2008 19:00 | Campeones: APOEL Nikosia | ||||
| I | Ironi Kiryat Shmona | - | FK Mogren Budva | 1:1 (1:0) | ||
| V | FK Mogren Budva | - | Ironi Kiryat Shmona | 0:3 (0:1) | ||
| I: 17.07.2008 18:00 | V: 31.07.2008 17:30 | Campeones: Ironi Kiryat Shmona | ||||
| I | Hapoel Tel Aviv | - | AC Juvenes/Dogana | 3:0 (3:0) | ||
| V | AC Juvenes/Dogana | - | Hapoel Tel Aviv | 0:2 (0:2) | ||
| I: 17.07.2008 18:00 | V: 31.07.2008 20:30 | Campeones: Hapoel Tel Aviv | ||||
| I | Khazar Lankaran | - | Lech Poznań | 0:1 (0:0) | ||
| V | Lech Poznań | - | Khazar Lankaran | 4:1 (1:1) | ||
| I: 17.07.2008 18:00 | V: 31.07.2008 20:45 | Campeones: Lech Poznań | ||||
| I | Vojvodina | - | Olimpik Baku | 1:0 (0:0) | ||
| V | Olimpik Baku | - | Vojvodina | 1:1 (0:0) | ||
| I: 17.07.2008 18:00 | V: 31.07.2008 16:00 | Campeones: Vojvodina | ||||
| I | FK Vetra | - | Viking FK | 1:0 (1:0) | ||
| V | Viking FK | - | FK Vetra | 2:0 (2:0) | ||
| I: 17.07.2008 18:00 | V: 31.07.2008 18:00 | Campeones: Viking FK | ||||
| I | FK Sūduva | - | The New Saints | 1:0 (0:0) | ||
| V | The New Saints | - | FK Sūduva | 0:1 (0:0) | ||
| I: 17.07.2008 18:00 | V: 31.07.2008 19:45 | Campeones: FK Sūduva | ||||
| I | Omonia Nikosia | - | Milano Kumanovo | 2:0 (1:0) | ||
| V | Milano Kumanovo | - | Omonia Nikosia | 1:2 (1:0) | ||
| I: 17.07.2008 19:00 | V: 31.07.2008 17:00 | Campeones: Omonia Nikosia | ||||
| I | Dacia Chişinău | - | Borac Čačak | 1:1 (0:0) | ||
| V | Borac Čačak | - | Dacia Chişinău | 3:1 (1:1) | ||
| I: 17.07.2008 19:00 | V: 31.07.2008 16:30 | Campeones: Borac Čačak | ||||
| I | Djurgårdens IF | - | FC Flora | 0:0 (0:0) | ||
| V | FC Flora | - | Djurgårdens IF | 2:2 (0:1) | ||
| I: 17.07.2008 19:00 | V: 31.07.2008 17:45 | Campeones: Djurgårdens IF | ||||
| I | Cherno More Varna | - | UE Sant Julià | 4:0 (0:0) | ||
| V | UE Sant Julià | - | Cherno More Varna | 0:5 (0:3) | ||
| I: 17.07.2008 19:30 | V: 31.07.2008 20:30 | Campeones: Cherno More Varna | ||||
| I | RFCU Luxemburg | - | Kalmar FF | 0:3 (0:1) | ||
| V | Kalmar FF | - | RFCU Luxemburg | 7:1 (3:0) | ||
| I: 17.07.2008 19:30 | V: 31.07.2008 19:00 | Campeones: Kalmar FF | ||||
| I | FC Vaduz | - | Zrinjski Mostar | 1:2 (1:1) | ||
| V | Zrinjski Mostar | - | FC Vaduz | 3:0 (2:0) | ||
| I: 17.07.2008 20:00 | V: 31.07.2008 20:30 | Campeones: Zrinjski Mostar | ||||
| I | Marsaxlokk FC | - | Slaven Belupo | 0:4 (0:3) | ||
| V | Slaven Belupo | - | Marsaxlokk FC | 4:0 (1:0) | ||
| I: 17.07.2008 20:00 | V: 31.07.2008 20:00 | Campeones: Slaven Belupo | ||||
| I | Győri ETO FC | - | FC Zestafoni | 1:1 (0:1) | ||
| V | FC Zestafoni | - | Győri ETO FC | 1:2 (0:0) | ||
| I: 17.07.2008 20:00 | V: 31.07.2008 15:00 | Campeones: Győri ETO FC | ||||
| I | Brøndby IF | - | B36 Tórshavn | 1:0 (0:0) | ||
| V | B36 Tórshavn | - | Brøndby IF | 0:2 (0:0) | ||
| I: 17.07.2008 20:00 | V: 31.07.2008 19:30 | Campeones: Brøndby IF | ||||
| I | EB/Streymur | - | Manchester City | 0:2 (0:2) | ||
| V | Manchester City | - | EB/Streymur | 2:0 (0:0) | ||
| I: 17.07.2008 20:00 | V: 31.07.2008 21:00 | Campeones: Manchester City | ||||
| I | Široki Brijeg | - | FK Partizani | 0:0 (0:0) | ||
| V | FK Partizani | - | Široki Brijeg | 1:3 (1:2) | ||
| I: 17.07.2008 20:15 | V: 31.07.2008 20:00 | Campeones: Široki Brijeg | ||||
| I | Hertha | - | Nistru Otaci | 8:1 (5:0) | ||
| V | Nistru Otaci | - | Hertha | 0:0 (0:0) | ||
| I: 17.07.2008 20:15 | V: 31.07.2008 18:00 | Campeones: Hertha | ||||
| I | Spartak Trnava | - | WIT Georgia | 2:2 (0:2) | ||
| V | WIT Georgia | - | Spartak Trnava | 1:0 (0:0) | ||
| I: 17.07.2008 20:15 | V: 31.07.2008 15:30 | Campeones: WIT Georgia | ||||
| I | FC Koper | - | FK Vllaznia | 1:2 (0:2) | ||
| V | FK Vllaznia | - | FC Koper | 0:0 (0:0) | ||
| I: 17.07.2008 20:30 | V: 31.07.2008 20:00 | Campeones: FK Vllaznia | ||||
| I | FK Zeta | - | Interblock Ljubljana | 1:1 (1:0) | ||
| V | Interblock Ljubljana | - | FK Zeta | 1:0 (0:0) | ||
| I: 17.07.2008 20:30 | V: 31.07.2008 20:45 | Campeones: Interblock Ljubljana | ||||
| I | RB Salzburg | - | FC Banants | 7:0 (4:0) | ||
| V | FC Banants | - | RB Salzburg | 0:3 (0:0) | ||
| I: 17.07.2008 20:30 | V: 31.07.2008 16:00 | Campeones: RB Salzburg | ||||
| I | Bangor City | - | FC Midtjylland | 1:6 (1:2) | ||
| V | FC Midtjylland | - | Bangor City | 4:0 (2:0) | ||
| I: 17.07.2008 20:30 | V: 31.07.2008 19:00 | Campeones: FC Midtjylland | ||||
| I | Legia Warszawa | - | FK Gomel | 0:0 (0:0) | ||
| V | FK Gomel | - | Legia Warszawa | 1:4 (1:1) | ||
| I: 17.07.2008 20:45 | V: 31.07.2008 18:00 | Campeones: Legia Warszawa | ||||
| I | Glentoran FC | - | FK Liepājas Metalurgs | 1:1 (1:1) | ||
| V | FK Liepājas Metalurgs | - | Glentoran FC | 2:0 (1:0) | ||
| I: 17.07.2008 20:45 | V: 31.07.2008 17:00 | Campeones: FK Liepājas Metalurgs | ||||
| I | Cliftonville FC | - | FC København | 0:4 (0:1) | ||
| V | FC København | - | Cliftonville FC | 7:0 (3:0) | ||
| I: 17.07.2008 20:45 | V: 31.07.2008 20:00 | Campeones: FC København | ||||
| I | Cork City | - | Haka Valkeakoski | 2:2 (0:1) | ||
| V | Haka Valkeakoski | - | Cork City | 4:0 (2:0) | ||
| I: 17.07.2008 20:45 | V: 31.07.2008 18:00 | Campeones: Haka Valkeakoski | ||||
| I | Hajduk Split | - | Birkirkara FC | 4:0 (2:0) | ||
| V | Birkirkara FC | - | Hajduk Split | 0:3 (0:2) | ||
| I: 17.07.2008 21:00 | V: 31.07.2008 18:00 | Campeones: Hajduk Split | ||||
| I | FH Hafnarfjörður | - | CS Grevenmacher | 3:2 (1:2) | ||
| V | CS Grevenmacher | - | FH Hafnarfjörður | 1:5 (1:1) | ||
| I: 17.07.2008 21:15 | V: 31.07.2008 20:00 | Campeones: FH Hafnarfjörður | ||||
