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| Clasificación | En casa | Fuera de casa | 1.ª vuelta | 2.ª vuelta | 1.ª parte | » 2.ª parte |
| # | Equipo | P | V | E | D | Goles | DG | Pun. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Mainz | 24 | 10 | 11 | 3 | 21:11 | 10 | 41 |
| 2 |
|
Erzgebirge Aue | 24 | 10 | 9 | 5 | 13:9 | 4 | 39 |
| 3 |
|
1. FC Nürnberg | 24 | 10 | 8 | 6 | 20:16 | 4 | 38 |
| 4 |
|
Energie Cottbus | 24 | 9 | 8 | 7 | 20:17 | 3 | 35 |
| 5 |
|
Karlsruher SC | 24 | 7 | 12 | 5 | 18:14 | 4 | 33 |
| 6 |
|
MSV Duisburg | 24 | 8 | 9 | 7 | 20:17 | 3 | 33 |
| 7 |
|
SpVgg Unterhaching | 24 | 7 | 11 | 6 | 14:16 | -2 | 32 |
| 8 |
|
Wacker Burghausen | 24 | 7 | 10 | 7 | 15:15 | 0 | 31 |
| 9 |
|
VfB Lübeck | 24 | 7 | 10 | 7 | 21:22 | -1 | 31 |
| 10 |
|
Rot-Weiß Oberhausen | 24 | 8 | 7 | 9 | 18:21 | -3 | 31 |
| 11 |
|
1. FC Union Berlin | 24 | 7 | 9 | 8 | 15:14 | 1 | 30 |
| 12 |
|
LR Ahlen | 24 | 7 | 9 | 8 | 17:17 | 0 | 30 |
| 13 |
|
Alemannia Aachen | 24 | 7 | 9 | 8 | 15:19 | -4 | 30 |
| 14 |
|
SpVgg Greuther Fürth | 24 | 6 | 11 | 7 | 16:17 | -1 | 29 |
| 15 |
|
Jahn Regensburg | 24 | 7 | 8 | 9 | 14:19 | -5 | 29 |
| 16 |
|
Eintracht Trier | 24 | 7 | 6 | 11 | 17:20 | -3 | 27 |
| 17 |
|
Arminia Bielefeld | 24 | 4 | 13 | 7 | 13:16 | -3 | 25 |
| 18 |
|
VfL Osnabrück | 24 | 4 | 8 | 12 | 11:18 | -7 | 20 |
