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| Clasificación | En casa | Fuera de casa | 1.ª vuelta | 2.ª vuelta | » 1.ª parte | 2.ª parte |
| # | Equipo | P | V | E | D | Goles | DG | Pun. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
SpVgg Unterhaching | 23 | 10 | 8 | 5 | 20:11 | 9 | 38 |
| 2 |
|
VfL Bochum | 23 | 8 | 12 | 3 | 16:8 | 8 | 36 |
| 3 |
|
Erzgebirge Aue | 23 | 9 | 9 | 5 | 11:7 | 4 | 36 |
| 4 |
|
Hansa Rostock | 23 | 9 | 8 | 6 | 14:16 | -2 | 35 |
| 5 |
|
SpVgg Greuther Fürth | 23 | 9 | 7 | 7 | 17:14 | 3 | 34 |
| 6 |
|
SC Paderborn 07 | 23 | 8 | 9 | 6 | 20:9 | 11 | 33 |
| 7 |
|
Alemannia Aachen | 23 | 8 | 9 | 6 | 17:12 | 5 | 33 |
| 8 |
|
Karlsruher SC | 23 | 7 | 10 | 6 | 13:12 | 1 | 31 |
| 9 |
|
Eintracht Braunschweig | 23 | 6 | 12 | 5 | 11:10 | 1 | 30 |
| 10 |
|
TSV 1860 München | 23 | 6 | 11 | 6 | 15:12 | 3 | 29 |
| 11 |
|
SC Freiburg | 23 | 5 | 13 | 5 | 10:11 | -1 | 28 |
| 12 |
|
Energie Cottbus | 23 | 4 | 14 | 5 | 10:10 | 0 | 26 |
| 13 |
|
Wacker Burghausen | 23 | 5 | 11 | 7 | 15:18 | -3 | 26 |
| 14 |
|
LR Ahlen | 23 | 6 | 8 | 9 | 13:19 | -6 | 26 |
| 15 |
|
Dynamo Dresden | 23 | 3 | 14 | 6 | 12:15 | -3 | 23 |
| 16 |
|
1. FC Saarbrücken | 23 | 4 | 10 | 9 | 11:19 | -8 | 22 |
| 17 |
|
Sportfreunde Siegen | 23 | 4 | 10 | 9 | 8:17 | -9 | 22 |
| 18 |
|
Kickers Offenbach | 23 | 4 | 9 | 10 | 7:20 | -13 | 21 |
