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| Clasificación | En casa | Fuera de casa | 1.ª vuelta | 2.ª vuelta | 1.ª parte | » 2.ª parte |
| # | Equipo | P | V | E | D | Goles | DG | Pun. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
SpVgg Greuther Fürth | 27 | 18 | 4 | 5 | 38:13 | 25 | 58 |
| 2 |
|
Fortuna Düsseldorf | 27 | 16 | 7 | 4 | 35:13 | 22 | 55 |
| 3 |
|
Eintracht Frankfurt | 27 | 14 | 9 | 4 | 36:16 | 20 | 51 |
| 4 |
|
SC Paderborn 07 | 27 | 13 | 8 | 6 | 27:18 | 9 | 47 |
| 5 |
|
FC St. Pauli | 27 | 14 | 5 | 8 | 25:17 | 8 | 47 |
| 6 |
|
TSV 1860 München | 27 | 13 | 7 | 7 | 27:18 | 9 | 46 |
| 7 |
|
1. FC Union Berlin | 27 | 9 | 7 | 11 | 26:29 | -3 | 34 |
| 8 |
|
MSV Duisburg | 27 | 8 | 10 | 9 | 18:22 | -4 | 34 |
| 9 |
|
Ingolstadt | 27 | 8 | 10 | 9 | 20:26 | -6 | 34 |
| 10 |
|
Dynamo Dresden | 27 | 8 | 9 | 10 | 23:29 | -6 | 33 |
| 11 |
|
Eintracht Braunschweig | 27 | 6 | 14 | 7 | 12:14 | -2 | 32 |
| 12 |
|
Erzgebirge Aue | 27 | 7 | 10 | 10 | 15:19 | -4 | 31 |
| 13 |
|
Energie Cottbus | 27 | 7 | 8 | 12 | 16:21 | -5 | 29 |
| 14 |
|
FSV Frankfurt | 27 | 7 | 8 | 12 | 16:28 | -12 | 29 |
| 15 |
|
Karlsruher SC | 27 | 7 | 6 | 14 | 14:25 | -11 | 27 |
| 16 |
|
VfL Bochum | 27 | 4 | 10 | 13 | 16:28 | -12 | 22 |
| 17 |
|
Hansa Rostock | 27 | 3 | 12 | 12 | 15:29 | -14 | 21 |
| 18 |
|
Alemannia Aachen | 27 | 2 | 14 | 11 | 9:23 | -14 | 20 |
| Ascenso | |
| Permanencia | |
| Permanencia | |
| Descenso |
