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| Clasificación | En casa | Fuera de casa | 1.ª vuelta | 2.ª vuelta | » 1.ª parte | 2.ª parte |
| # | Equipo | P | V | E | D | Goles | DG | Pun. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
SpVgg Greuther Fürth | 28 | 17 | 8 | 3 | 26:8 | 18 | 59 |
| 2 |
|
Eintracht Frankfurt | 28 | 16 | 7 | 5 | 32:11 | 21 | 55 |
| 3 |
|
FC St. Pauli | 28 | 12 | 12 | 4 | 20:10 | 10 | 48 |
| 4 |
|
1. FC Union Berlin | 28 | 11 | 10 | 7 | 19:18 | 1 | 43 |
| 5 |
|
Eintracht Braunschweig | 28 | 11 | 9 | 8 | 20:15 | 5 | 42 |
| 6 |
|
TSV 1860 München | 28 | 11 | 8 | 9 | 22:19 | 3 | 41 |
| 7 |
|
Dynamo Dresden | 28 | 9 | 13 | 6 | 19:16 | 3 | 40 |
| 8 |
|
Fortuna Düsseldorf | 28 | 9 | 12 | 7 | 21:14 | 7 | 39 |
| 9 |
|
SC Paderborn 07 | 28 | 8 | 14 | 6 | 16:14 | 2 | 38 |
| 10 |
|
VfL Bochum | 28 | 8 | 12 | 8 | 19:20 | -1 | 36 |
| 11 |
|
Energie Cottbus | 28 | 8 | 11 | 9 | 10:17 | -7 | 35 |
| 12 |
|
Alemannia Aachen | 28 | 6 | 15 | 7 | 13:14 | -1 | 33 |
| 13 |
|
FSV Frankfurt | 28 | 7 | 10 | 11 | 16:24 | -8 | 31 |
| 14 |
|
Ingolstadt | 28 | 5 | 13 | 10 | 13:19 | -6 | 28 |
| 15 |
|
MSV Duisburg | 28 | 4 | 14 | 10 | 14:19 | -5 | 26 |
| 16 |
|
Hansa Rostock | 28 | 3 | 14 | 11 | 9:18 | -9 | 23 |
| 17 |
|
Erzgebirge Aue | 28 | 1 | 16 | 11 | 11:25 | -14 | 19 |
| 18 |
|
Karlsruher SC | 28 | 3 | 8 | 17 | 13:32 | -19 | 17 |
| Ascenso | |
| Permanencia | |
| Permanencia | |
| Descenso |
