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| Clasificación | En casa | Fuera de casa | 1.ª vuelta | 2.ª vuelta | » 1.ª parte | 2.ª parte |
| # | Equipo | P | V | E | D | Goles | DG | Pun. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Karlsruher SC | 28 | 10 | 16 | 2 | 18:6 | 12 | 46 |
| 2 |
|
1. FC Union Berlin | 28 | 11 | 12 | 5 | 18:9 | 9 | 45 |
| 3 |
|
FC St. Pauli | 28 | 10 | 14 | 4 | 16:10 | 6 | 44 |
| 4 |
|
Colonia | 28 | 9 | 16 | 3 | 17:4 | 13 | 43 |
| 5 |
|
SV Sandhausen | 28 | 8 | 19 | 1 | 14:5 | 9 | 43 |
| 6 |
|
SC Paderborn 07 | 28 | 10 | 12 | 6 | 18:15 | 3 | 42 |
| 7 |
|
FSV Frankfurt | 28 | 11 | 9 | 8 | 18:16 | 2 | 42 |
| 8 |
|
SpVgg Greuther Fürth | 28 | 9 | 9 | 10 | 18:17 | 1 | 36 |
| 9 |
|
VfL Bochum | 28 | 8 | 12 | 8 | 12:13 | -1 | 36 |
| 10 |
|
Energie Cottbus | 28 | 8 | 11 | 9 | 19:20 | -1 | 35 |
| 11 |
|
Ingolstadt | 28 | 6 | 16 | 6 | 12:14 | -2 | 34 |
| 12 |
|
Fortuna Düsseldorf | 28 | 7 | 12 | 9 | 11:15 | -4 | 33 |
| 13 |
|
1. FC Kaiserslautern | 28 | 5 | 15 | 8 | 15:15 | 0 | 30 |
| 14 |
|
VfR Aalen | 28 | 4 | 16 | 8 | 11:19 | -8 | 28 |
| 15 |
|
TSV 1860 München | 28 | 3 | 18 | 7 | 10:14 | -4 | 27 |
| 16 |
|
Dynamo Dresden | 28 | 3 | 17 | 8 | 9:18 | -9 | 26 |
| 17 |
|
Erzgebirge Aue | 28 | 6 | 7 | 15 | 13:24 | -11 | 25 |
| 18 |
|
Arminia Bielefeld | 28 | 2 | 13 | 13 | 8:23 | -15 | 19 |
| Ascenso | |
| Permanencia | |
| Permanencia | |
| Descenso |
