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| Clasificación | » En casa | Fuera de casa | 1.ª vuelta | 2.ª vuelta |
| # | Equipo | P | V | E | D | Goles | DG | Pun. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
JEF United Chiba | 8 | 6 | 1 | 1 | 16:7 | 9 | 19 |
| 2 |
|
Thespakusatsu Gunma | 9 | 5 | 2 | 2 | 16:11 | 5 | 17 |
| 3 |
|
Sagan Tosu | 9 | 5 | 1 | 3 | 17:9 | 8 | 16 |
| 4 |
|
Consadole Sapporo | 8 | 5 | 1 | 2 | 13:6 | 7 | 16 |
| 5 |
|
FC Tokyo | 9 | 4 | 4 | 1 | 8:4 | 4 | 16 |
| 6 |
|
Tochigi SC | 9 | 5 | 1 | 3 | 11:10 | 1 | 16 |
| 7 |
|
Fagiano Okayama | 9 | 4 | 3 | 2 | 13:7 | 6 | 15 |
| 8 |
|
Shonan Bellmare | 9 | 4 | 2 | 3 | 13:7 | 6 | 14 |
| 9 |
|
Mito HollyHock | 8 | 4 | 2 | 2 | 9:9 | 0 | 14 |
| 10 |
|
Oita Trinita | 9 | 3 | 4 | 2 | 9:8 | 1 | 13 |
| 11 |
|
Ehime FC | 8 | 4 | 1 | 3 | 8:7 | 1 | 13 |
| 12 |
|
Tokushima Vortis | 8 | 4 | 1 | 3 | 7:10 | -3 | 13 |
| 13 |
|
Tokyo Verdy | 8 | 3 | 3 | 2 | 11:8 | 3 | 12 |
| 14 |
|
Kyoto Sanga FC | 8 | 3 | 3 | 2 | 9:6 | 3 | 12 |
| 15 |
|
Roasso Kumamoto | 8 | 3 | 3 | 2 | 6:5 | 1 | 12 |
| 16 |
|
Giravanz Kitakyushu | 8 | 3 | 3 | 2 | 6:8 | -2 | 12 |
| 17 |
|
Gainare Tottori | 9 | 2 | 4 | 3 | 12:12 | 0 | 10 |
| 18 |
|
Yokohama FC | 9 | 2 | 2 | 5 | 8:12 | -4 | 8 |
| 19 |
|
Kataller Toyama | 8 | 2 | 1 | 5 | 7:17 | -10 | 7 |
| 20 |
|
FC Gifu | 9 | 1 | 0 | 8 | 6:19 | -13 | 3 |
| Ascenso |
