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| Clasificación | En casa | Fuera de casa | 1.ª vuelta | 2.ª vuelta | 1.ª parte | » 2.ª parte |
| # | Equipo | P | V | E | D | Goles | DG | Pun. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
SpVgg Unterhaching | 26 | 16 | 9 | 1 | 39:11 | 28 | 57 |
| 2 |
|
TSV 1860 München II | 26 | 14 | 7 | 5 | 24:11 | 13 | 49 |
| 3 |
|
1. FC Schweinfurt 05 | 26 | 11 | 9 | 6 | 28:23 | 5 | 42 |
| 4 |
|
VfR Garching | 26 | 11 | 8 | 7 | 29:21 | 8 | 41 |
| 5 |
|
Augsburgo II | 26 | 10 | 10 | 6 | 23:15 | 8 | 40 |
| 6 |
|
SpVgg Bayreuth | 26 | 10 | 9 | 7 | 23:19 | 4 | 39 |
| 7 |
|
1. FC Nürnberg II | 26 | 10 | 7 | 9 | 30:32 | -2 | 37 |
| 8 |
|
FC Memmingen | 26 | 8 | 11 | 7 | 23:17 | 6 | 35 |
| 9 |
|
Wacker Burghausen | 26 | 8 | 10 | 8 | 23:22 | 1 | 34 |
| 10 |
|
TSV 1860 Rosenheim | 26 | 9 | 7 | 10 | 23:27 | -4 | 34 |
| 11 |
|
Bayern Múnich II | 26 | 7 | 12 | 7 | 21:19 | 2 | 33 |
| 12 |
|
TSV Buchbach | 26 | 8 | 8 | 10 | 20:22 | -2 | 32 |
| 13 |
|
FV Illertissen | 26 | 7 | 11 | 8 | 14:17 | -3 | 32 |
| 14 |
|
Ingolstadt II | 26 | 8 | 6 | 12 | 22:28 | -6 | 30 |
| 15 |
|
SpVgg Greuther Fürth II | 26 | 6 | 7 | 13 | 12:23 | -11 | 25 |
| 16 |
|
SV Schalding-Heining | 26 | 5 | 9 | 12 | 18:28 | -10 | 24 |
| 17 |
|
SV Seligenporten | 26 | 5 | 6 | 15 | 18:39 | -21 | 21 |
| 18 |
|
SpVgg Bayern Hof | 26 | 4 | 8 | 14 | 14:30 | -16 | 20 |
| Playoff | |
| Permanencia | |
| Descenso |
