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| 20.03.1999 | 15:00 | 1. FC Saarbrücken | - | SV 07 Elversberg | 1:1 (0:1) | |
| 15:00 | LR Ahlen | - | Wuppertaler SV | 1:1 (0:0) | ||
| 15:30 | Eintracht Trier | - | SpVgg Erkenschwick | 2:0 (2:0) | ||
| 21.03.1999 | 15:00 | Sportfreunde Siegen | - | FC 08 Homburg | 3:0 (3:0) | |
| 15:00 | SC Paderborn 07 | - | Bayer Leverkusen II | 3:0 (2:0) | ||
| 15:00 | 1. FC Kaiserslautern II | - | SC Verl | 1:1 (1:0) | ||
| 15:00 | Borussia Dortmund II | - | Preußen Münster | 3:2 (1:1) | ||
| 15:00 | FC Remscheid | - | FSV Salmrohr | 1:0 (0:0) |
| » Clasificación | En casa | Fuera de casa | 1.ª vuelta | 2.ª vuelta | 1.ª parte | 2.ª parte |
| # | Equipo | P | V | E | D | Goles | DG | Pun. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
1. FC Saarbrücken | 24 | 13 | 6 | 5 | 41:23 | 18 | 45 |
| 2 |
|
SC Paderborn 07 | 23 | 13 | 5 | 5 | 44:23 | 21 | 44 |
| 3 |
|
Eintracht Trier | 24 | 12 | 6 | 6 | 41:28 | 13 | 42 |
| 4 |
|
Preußen Münster | 23 | 11 | 8 | 4 | 43:24 | 19 | 41 |
| 5 |
|
Sportfreunde Siegen | 23 | 11 | 7 | 5 | 33:14 | 19 | 40 |
| 6 |
|
SC Verl | 24 | 11 | 7 | 6 | 48:37 | 11 | 40 |
| 7 |
|
Alemannia Aachen | 23 | 12 | 4 | 7 | 39:32 | 7 | 40 |
| 8 |
|
LR Ahlen | 24 | 10 | 8 | 6 | 42:31 | 11 | 38 |
| 9 |
|
Wuppertaler SV | 23 | 11 | 3 | 9 | 41:40 | 1 | 36 |
| 10 |
|
Bayer Leverkusen II | 24 | 9 | 8 | 7 | 41:37 | 4 | 35 |
| 11 |
|
1. FC Kaiserslautern II | 24 | 6 | 11 | 7 | 42:41 | 1 | 29 |
| 12 |
|
SV 07 Elversberg | 23 | 5 | 11 | 7 | 21:28 | -7 | 26 |
| 13 |
|
FC 08 Homburg | 24 | 6 | 8 | 10 | 23:39 | -16 | 26 |
| 14 |
|
Borussia Dortmund II | 24 | 5 | 7 | 12 | 32:45 | -13 | 22 |
| 15 |
|
FSV Salmrohr | 24 | 5 | 5 | 14 | 24:41 | -17 | 20 |
| 16 |
|
SpVgg Erkenschwick | 23 | 2 | 5 | 16 | 24:54 | -30 | 11 |
| 17 |
|
FC Remscheid | 23 | 2 | 3 | 18 | 17:59 | -42 | 9 |
