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| Clasificación | » En casa | Fuera de casa | 1.ª vuelta | 2.ª vuelta |
| # | Equipo | P | V | E | D | Goles | DG | Pun. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Dynamo České Budějovice | 9 | 8 | 0 | 1 | 22:6 | 16 | 24 |
| 2 |
|
Vysočina Jihlava | 9 | 7 | 1 | 1 | 17:6 | 11 | 22 |
| 3 |
|
MFK Vítkovice | 8 | 7 | 0 | 1 | 13:8 | 5 | 21 |
| 4 |
|
FC Hradec Králové | 8 | 6 | 1 | 1 | 16:4 | 12 | 19 |
| 5 |
|
FK Ústí nad Labem | 8 | 6 | 1 | 1 | 17:7 | 10 | 19 |
| 6 |
|
FK Pardubice | 8 | 5 | 3 | 0 | 15:4 | 11 | 18 |
| 7 |
|
FK Varnsdorf | 9 | 5 | 2 | 2 | 7:3 | 4 | 17 |
| 8 |
|
FC Sellier & Bellot Vlašim | 9 | 4 | 3 | 2 | 15:10 | 5 | 15 |
| 9 |
|
Zbrojovka Brno | 8 | 4 | 2 | 2 | 15:8 | 7 | 14 |
| 10 |
|
FK Baník Sokolov | 8 | 4 | 1 | 3 | 12:9 | 3 | 13 |
| 11 |
|
Viktoria Žižkov | 9 | 3 | 3 | 3 | 16:16 | 0 | 12 |
| 12 |
|
1. SK Prostějov | 9 | 2 | 5 | 2 | 7:8 | -1 | 11 |
| 13 |
|
FK Fotbal Třinec | 9 | 3 | 2 | 4 | 10:11 | -1 | 11 |
| 14 |
|
MFK Chrudim | 8 | 3 | 1 | 4 | 15:11 | 4 | 10 |
| 15 |
|
FK MAS Táborsko | 8 | 2 | 3 | 3 | 11:11 | 0 | 9 |
| 16 |
|
1. SC Znojmo | 9 | 2 | 2 | 5 | 7:12 | -5 | 8 |
| Ascenso | |
| Playoff | |
| Descenso |
