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| Clasificación | » En casa | Fuera de casa | 1.ª vuelta | 2.ª vuelta |
| # | Equipo | P | V | E | D | Goles | DG | Pun. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
MFK Karviná | 9 | 8 | 0 | 1 | 16:4 | 12 | 24 |
| 2 |
|
FK Varnsdorf | 10 | 7 | 1 | 2 | 22:10 | 12 | 22 |
| 3 |
|
FK Viagem Příbram | 10 | 5 | 5 | 0 | 20:7 | 13 | 20 |
| 4 |
|
FK Dukla Praha | 10 | 6 | 2 | 2 | 19:6 | 13 | 20 |
| 5 |
|
MFK Vyškov | 9 | 6 | 2 | 1 | 20:8 | 12 | 20 |
| 6 |
|
Sigma Olomouc B | 10 | 5 | 3 | 2 | 16:13 | 3 | 18 |
| 7 |
|
FK MAS Táborsko | 9 | 4 | 4 | 1 | 9:5 | 4 | 16 |
| 8 |
|
Slavia Praha B | 10 | 5 | 1 | 4 | 20:19 | 1 | 16 |
| 9 |
|
FK Třinec | 10 | 4 | 3 | 3 | 16:16 | 0 | 15 |
| 10 |
|
SK Líšeň | 9 | 4 | 2 | 3 | 14:6 | 8 | 14 |
| 11 |
|
FC Sellier & Bellot Vlašim | 9 | 4 | 2 | 3 | 18:11 | 7 | 14 |
| 12 |
|
1. SK Prostějov | 10 | 3 | 4 | 3 | 17:15 | 2 | 13 |
| 13 |
|
MFK Chrudim | 9 | 3 | 3 | 3 | 13:9 | 4 | 12 |
| 14 |
|
SFC Opava | 10 | 3 | 3 | 4 | 10:8 | 2 | 12 |
| 15 |
|
AC Sparta Praha B | 9 | 3 | 3 | 3 | 8:9 | -1 | 12 |
| 16 |
|
Vysočina Jihlava | 9 | 2 | 4 | 3 | 9:10 | -1 | 10 |
| Ascenso | |
| Playoff | |
| Descenso |
