| 1. Jornada | 18.01.2009 | CF Monterrey | - | Puebla FC | 4:0 |  |
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| 2. Jornada | 25.01.2009 | Puebla FC | - | Club Necaxa | 1:0 |  |
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| 5. Jornada | 15.02.2009 | Monarcas Morelia | - | Puebla FC | 1:2 | ||||
| 6. Jornada | 19.02.2009 | Puebla FC | - | CF Pachuca | 2:2 | |
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| 7. Jornada | 22.02.2009 | Jaguares Chiapas | - | Puebla FC | 2:4 | ||||
| 9. Jornada | 08.03.2009 | UANL Tigres | - | Puebla FC | 1:2 | ||||
| 10. Jornada | 15.03.2009 | Puebla FC | - | Club San Luis | 2:1 |  |
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| 11. Jornada | 22.03.2009 | Atlante | - | Puebla FC | 0:1 | ||||
| 12. Jornada | 05.04.2009 | Puebla FC | - | CF América | 2:3 | |
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| 13. Jornada | 12.04.2009 | Pumas UNAM | - | Puebla FC | 3:1 | ||||
| 14. Jornada | 19.04.2009 | Cruz Azul | - | Puebla FC | 1:2 | |
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| 15. Jornada | 26.04.2009 | Puebla FC | - | Indios Juárez | 0:2 | |
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| 16. Jornada | 03.05.2009 | Deportivo Guadalajara | - | Puebla FC | 0:0 |
Uruguay