| 1. Jornada | 14.07.2012 | Spartak Trnava | - | MFK Košice | 0:0 | ||||
| 2. Jornada | 22.07.2012 | MFK Košice | - | Slovan Bratislava | 1:0 |  |
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| 3. Jornada | 29.07.2012 | FK Senica | - | MFK Košice | 2:1 | |
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| 4. Jornada | 04.08.2012 | MFK Košice | - | AS Trenčín | 3:0 | |
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| 5. Jornada | 11.08.2012 | MFK Ružomberok | - | MFK Košice | 3:1 | ||||
| 6. Jornada | 18.08.2012 | MFK Košice | - | Zlaté Moravce | 2:1 | |
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| 7. Jornada | 25.08.2012 | FC Nitra | - | MFK Košice | 4:1 | |
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| 8. Jornada | 01.09.2012 | MFK Košice | - | FK Dukla Banská Bystrica | 1:0 |  |
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| 9. Jornada | 15.09.2012 | 1. FC Tatran Prešov | - | MFK Košice | 0:0 | ||||
| 10. Jornada | 22.09.2012 | Spartak Myjava | - | MFK Košice | 3:1 | |
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| 11. Jornada | 29.09.2012 | MFK Košice | - | MŠK Žilina | 1:1 | ||||
| 12. Jornada | 05.10.2012 | MFK Košice | - | Spartak Trnava | 1:0 | |
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| 13. Jornada | 21.10.2012 | Slovan Bratislava | - | MFK Košice | 3:1 | |
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| 14. Jornada | 27.10.2012 | MFK Košice | - | FK Senica | 2:2 | |
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| 15. Jornada | 03.11.2012 | AS Trenčín | - | MFK Košice | 0:0 | ||||
| 18. Jornada | 24.11.2012 | MFK Košice | - | FC Nitra | 4:0 | |
Eslovaquia