| 1. Jornada | 16.07.2016 | NK Istra 1961 | - | NK Osijek | 0:1 | ||||
| 2. Jornada | 22.07.2016 | HNK Rijeka | - | NK Istra 1961 | 4:1 | ||||
| 3. Jornada | 31.07.2016 | NK Istra 1961 | - | Lokomotiva Zagreb | 1:1 | ||||
| 4. Jornada | 07.08.2016 | Hajduk Split | - | NK Istra 1961 | 4:0 | ||||
| 5. Jornada | 14.08.2016 | NK Istra 1961 | - | Slaven Belupo | 0:0 | ||||
| 7. Jornada | 28.08.2016 | NK Istra 1961 | - | Dinamo Zagreb | 1:2 |  |
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| 8. Jornada | 10.09.2016 | RNK Split | - | NK Istra 1961 | 0:3 | ||||
| 9. Jornada | 17.09.2016 | NK Istra 1961 | - | NK Inter Zaprešić | 4:1 | ||||
| 30. Jornada | 26.04.2017 | Lokomotiva Zagreb | - | NK Istra 1961 | 1:0 | ||||
| 31. Jornada | 30.04.2017 | NK Istra 1961 | - | Hajduk Split | 0:2 | ||||
| 32. Jornada | 07.05.2017 | Slaven Belupo | - | NK Istra 1961 | 2:0 | ||||
| 33. Jornada | 12.05.2017 | NK Istra 1961 | - | HNK Cibalia | 1:2 |
Croacia