| 1. Jornada | 29.01.2012 | Atlético Junior | - | Deportes Quindío | 1:1 | ||||
| 2. Jornada | 05.02.2012 | Real Cartagena | - | Atlético Junior | 2:1 |  |
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| 4. Jornada | 18.02.2012 | Atlético Junior | - | Deportivo Cali | 1:0 | |
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| 6. Jornada | 03.03.2012 | Atlético Junior | - | Itagüi Ditaires | 2:1 | ||||
| 8. Jornada | 17.03.2012 | Atlético Junior | - | Boyacá Chicó | 3:1 | |
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| 9. Jornada | 25.03.2012 | Atlético Junior | - | Real Cartagena | 3:1 | ||||
| 10. Jornada | 01.04.2012 | Santa Fe | - | Atlético Junior | 2:1 | ||||
| 11. Jornada | 08.04.2012 | Atlético Junior | - | Millonarios | 1:3 | ||||
| 15. Jornada | 06.05.2012 | Atlético Junior | - | Cúcuta Deportivo | 4:0 | ||||
| 16. Jornada | 14.05.2012 | Atlético Nacional | - | Atlético Junior | 3:1 | ||||
| 17. Jornada | 21.05.2012 | Atlético Junior | - | Independiente Medellín | 1:0 | |
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| 18. Jornada | 27.05.2012 | Once Caldas | - | Atlético Junior | 2:2 |
Colombia