| 4. Jornada | 17.08.2008 | Dinamo Zagreb | - | HNK Cibalia | 6:0 | ||||
| 7. Jornada | 14.09.2008 | HNK Cibalia | - | HNK Rijeka | 3:1 | ||||
| 12. Jornada | 26.10.2008 | Slaven Belupo | - | HNK Cibalia | 1:0 | ||||
| 13. Jornada | 02.11.2008 | HNK Cibalia | - | NK Osijek | 0:3 | ||||
| 14. Jornada | 09.11.2008 | HNK Šibenik | - | HNK Cibalia | 4:0 |  |
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| 16. Jornada | 23.11.2008 | NK Inter Zaprešić | - | HNK Cibalia | 1:2 | ||||
| 17. Jornada | 30.11.2008 | HNK Cibalia | - | NK Croatia Sesvete | 3:1 | ||||
| 18. Jornada | 07.12.2008 | HNK Rijeka | - | HNK Cibalia | 1:0 | ||||
| 20. Jornada | 01.03.2009 | HNK Cibalia | - | NK Varteks | 1:0 | ||||
| 21. Jornada | 08.03.2009 | NK Zagreb | - | HNK Cibalia | 0:0 | |
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| 22. Jornada | 15.03.2009 | HNK Cibalia | - | Hajduk Split | 1:1 | ||||
| 23. Jornada | 22.03.2009 | Slaven Belupo | - | HNK Cibalia | 1:1 | |
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| 25. Jornada | 11.04.2009 | Hajduk Split | - | HNK Cibalia | 2:0 | |
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| 28. Jornada | 26.04.2009 | NK Inter Zaprešić | - | HNK Cibalia | 0:0 | ||||
| 29. Jornada | 03.05.2009 | HNK Cibalia | - | NK Croatia Sesvete | 3:0 |  |
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| 30. Jornada | 10.05.2009 | NK Zadar | - | HNK Cibalia | 3:1 |
Croacia