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| Clasificación | » En casa | Fuera de casa | 1.ª vuelta | 2.ª vuelta |
| # | Equipo | P | V | E | D | Goles | DG | Pun. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Shonan Bellmare | 21 | 16 | 4 | 1 | 42:11 | 31 | 52 |
| 2 |
|
JEF United Chiba | 21 | 12 | 5 | 4 | 29:20 | 9 | 41 |
|
Oita Trinita | 20 | 13 | 2 | 5 | 29:20 | 9 | 41 | |
| 4 |
|
Matsumoto Yamaga | 20 | 11 | 5 | 4 | 28:20 | 8 | 38 |
| 5 |
|
Giravanz Kitakyushu | 21 | 11 | 4 | 6 | 29:29 | 0 | 37 |
| 6 |
|
Júbilo Iwata | 21 | 10 | 6 | 5 | 38:27 | 11 | 36 |
| 7 |
|
Consadole Sapporo | 20 | 9 | 7 | 4 | 28:17 | 11 | 34 |
| 8 |
|
Montedio Yamagata | 20 | 10 | 3 | 7 | 32:22 | 10 | 33 |
| 9 |
|
FC Gifu | 21 | 8 | 5 | 8 | 36:35 | 1 | 29 |
| 10 |
|
Fagiano Okayama | 21 | 6 | 11 | 4 | 24:24 | 0 | 29 |
| 11 |
|
Kyoto Sanga FC | 20 | 5 | 13 | 2 | 28:23 | 5 | 28 |
| 12 |
|
Ehime FC | 21 | 8 | 4 | 9 | 29:26 | 3 | 28 |
| 13 |
|
Yokohama FC | 20 | 7 | 6 | 7 | 24:20 | 4 | 27 |
| 14 |
|
Tochigi SC | 20 | 7 | 6 | 7 | 29:26 | 3 | 27 |
| 15 |
|
Thespakusatsu Gunma | 20 | 7 | 5 | 8 | 24:24 | 0 | 26 |
| 16 |
|
Avispa Fukuoka | 20 | 7 | 4 | 9 | 22:24 | -2 | 25 |
| 17 |
|
V-Varen Nagasaki | 21 | 5 | 10 | 6 | 15:18 | -3 | 25 |
| 18 |
|
Roasso Kumamoto | 21 | 6 | 7 | 8 | 22:27 | -5 | 25 |
| 19 |
|
Mito HollyHock | 21 | 5 | 8 | 8 | 26:23 | 3 | 23 |
| 20 |
|
Tokyo Verdy | 21 | 4 | 8 | 9 | 13:26 | -13 | 20 |
| 21 |
|
Kamatamare Sanuki | 20 | 4 | 5 | 11 | 14:30 | -16 | 17 |
| 22 |
|
Kataller Toyama | 20 | 3 | 5 | 12 | 13:30 | -17 | 14 |
| Ascenso | |
| Playoff | |
| Permanencia | |
| Descenso |
