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| Clasificación | » En casa | Fuera de casa | 1.ª vuelta | 2.ª vuelta |
| # | Equipo | P | V | E | D | Goles | DG | Pun. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Omiya Ardija | 8 | 6 | 2 | 0 | 12:4 | 8 | 20 |
| 2 |
|
Zweigen Kanazawa | 8 | 5 | 2 | 1 | 13:6 | 7 | 17 |
| 3 |
|
Júbilo Iwata | 8 | 5 | 1 | 2 | 14:7 | 7 | 16 |
| 4 |
|
Avispa Fukuoka | 8 | 5 | 1 | 2 | 12:9 | 3 | 16 |
| 5 |
|
Tokyo Verdy | 8 | 4 | 3 | 1 | 11:5 | 6 | 15 |
| 6 |
|
JEF United Chiba | 8 | 4 | 2 | 2 | 14:10 | 4 | 14 |
| 7 |
|
Ehime FC | 7 | 4 | 1 | 2 | 10:7 | 3 | 13 |
| 8 |
|
V-Varen Nagasaki | 8 | 3 | 3 | 2 | 10:7 | 3 | 12 |
| 9 |
|
Kamatamare Sanuki | 8 | 3 | 3 | 2 | 5:4 | 1 | 12 |
| 10 |
|
Mito HollyHock | 7 | 3 | 2 | 2 | 9:7 | 2 | 11 |
| 11 |
|
Fagiano Okayama | 7 | 2 | 4 | 1 | 7:2 | 5 | 10 |
| 12 |
|
Consadole Sapporo | 7 | 3 | 1 | 3 | 10:8 | 2 | 10 |
| 13 |
|
FC Gifu | 8 | 3 | 1 | 4 | 5:12 | -7 | 10 |
| 14 |
|
Cerezo Osaka | 7 | 3 | 0 | 4 | 11:9 | 2 | 9 |
| 15 |
|
Giravanz Kitakyushu | 6 | 3 | 0 | 3 | 6:6 | 0 | 9 |
| 16 |
|
Tokushima Vortis | 7 | 2 | 3 | 2 | 4:4 | 0 | 9 |
| 17 |
|
Yokohama FC | 7 | 1 | 4 | 2 | 10:11 | -1 | 7 |
| 18 |
|
Tochigi SC | 8 | 1 | 4 | 3 | 9:12 | -3 | 7 |
| 19 |
|
Oita Trinita | 8 | 1 | 2 | 5 | 9:12 | -3 | 5 |
| 20 |
|
Kyoto Sanga FC | 7 | 1 | 2 | 4 | 5:11 | -6 | 5 |
| 21 |
|
Thespakusatsu Gunma | 7 | 1 | 1 | 5 | 2:8 | -6 | 4 |
| 22 |
|
Roasso Kumamoto | 8 | 0 | 4 | 4 | 5:13 | -8 | 4 |
| Ascenso | |
| Playoff | |
| Permanencia | |
| Descenso |
