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| Clasificación | » En casa | Fuera de casa | 1.ª vuelta | 2.ª vuelta |
| # | Equipo | P | V | E | D | Goles | DG | Pun. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
V-Varen Nagasaki | 20 | 13 | 4 | 3 | 34:14 | 20 | 43 |
| 2 |
|
Tokushima Vortis | 21 | 11 | 7 | 3 | 33:11 | 22 | 40 |
| 3 |
|
Kyoto Sanga FC | 20 | 12 | 4 | 4 | 33:20 | 13 | 40 |
| 4 |
|
Giravanz Kitakyushu | 21 | 12 | 4 | 5 | 30:19 | 11 | 40 |
| 5 |
|
Júbilo Iwata | 21 | 11 | 6 | 4 | 38:21 | 17 | 39 |
| 6 |
|
Avispa Fukuoka | 20 | 11 | 4 | 5 | 25:16 | 9 | 37 |
| 7 |
|
Ventforet Kofu | 20 | 10 | 7 | 3 | 25:17 | 8 | 37 |
| 8 |
|
Montedio Yamagata | 21 | 11 | 3 | 7 | 36:22 | 14 | 36 |
| 9 |
|
FC Machida Zelvia | 21 | 7 | 9 | 5 | 23:19 | 4 | 30 |
| 10 |
|
Fagiano Okayama | 21 | 8 | 6 | 7 | 25:24 | 1 | 30 |
| 11 |
|
Omiya Ardija | 20 | 7 | 8 | 5 | 21:21 | 0 | 29 |
| 12 |
|
Tochigi SC | 20 | 7 | 7 | 6 | 20:16 | 4 | 28 |
| 13 |
|
FC Ryūkyū | 20 | 7 | 6 | 7 | 34:25 | 9 | 27 |
| 14 |
|
Mito HollyHock | 21 | 7 | 6 | 8 | 31:32 | -1 | 27 |
| 15 |
|
Tokyo Verdy | 20 | 6 | 8 | 6 | 23:20 | 3 | 26 |
| 16 |
|
Albirex Niigata | 21 | 6 | 8 | 7 | 27:30 | -3 | 26 |
| 17 |
|
Matsumoto Yamaga | 20 | 6 | 8 | 6 | 22:26 | -4 | 26 |
| 18 |
|
Zweigen Kanazawa | 21 | 6 | 7 | 8 | 27:31 | -4 | 25 |
| 19 |
|
Renofa Yamaguchi | 20 | 7 | 2 | 11 | 24:31 | -7 | 23 |
| 20 |
|
JEF United Chiba | 20 | 5 | 4 | 11 | 20:30 | -10 | 19 |
| 21 |
|
Thespakusatsu Gunma | 21 | 6 | 1 | 14 | 17:36 | -19 | 19 |
| 22 |
|
Ehime FC | 21 | 3 | 4 | 14 | 14:32 | -18 | 13 |
| Ascenso |
