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| 19.11.2012 | 05:00 | SKA-Energiya Khabarovsk | - | Metallurg-Kuzbass Novokuznetsk | 1:0 (1:0) | |
| 15:00 | FC Volgar-Gazprom | - | Shinnik Yaroslavl | 1:1 (0:1) | ||
| 15:30 | Torpedo Moskva | - | FK Ural | 2:3 (2:2) | ||
| 16:00 | FC Salyut Belgorod | - | FK Neftekhimik | 2:0 (1:0) | ||
| 20.11.2012 | 12:30 | Sibir Novosibirsk | - | Baltika Kaliningrad | 3:1 (2:0) | |
| 13:00 | FK Tom Tomsk | - | FK Ufa | 0:0 (0:0) | ||
| 15:00 | Spartak Nalchik | - | Enisey Krasnoyarsk | 0:2 (0:2) | ||
| 17:00 | FK Khimki | - | FC Petrotrest | 1:0 (0:0) |
| » Clasificación | En casa | Fuera de casa | 1.ª vuelta | 2.ª vuelta |
| # | Equipo | P | V | E | D | Goles | DG | Pun. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
FK Tom Tomsk | 21 | 15 | 4 | 2 | 42:22 | 20 | 49 |
| 2 |
|
FK Ural | 21 | 13 | 6 | 2 | 46:13 | 33 | 45 |
| 3 |
|
SKA-Energiya Khabarovsk | 21 | 9 | 9 | 3 | 24:16 | 8 | 36 |
| 4 |
|
FK Neftekhimik | 21 | 10 | 5 | 6 | 31:24 | 7 | 35 |
| 5 |
|
Sibir Novosibirsk | 21 | 9 | 5 | 7 | 24:22 | 2 | 32 |
| 6 |
|
Baltika Kaliningrad | 21 | 9 | 5 | 7 | 23:24 | -1 | 32 |
| 7 |
|
Rotor Volgograd | 20 | 9 | 4 | 7 | 18:14 | 4 | 31 |
| 8 |
|
FK Ufa | 21 | 8 | 7 | 6 | 22:22 | 0 | 31 |
| 9 |
|
Spartak Nalchik | 20 | 9 | 4 | 7 | 17:20 | -3 | 31 |
| 10 |
|
Enisey Krasnoyarsk | 21 | 6 | 6 | 9 | 19:21 | -2 | 24 |
| 11 |
|
FC Petrotrest | 21 | 7 | 3 | 11 | 22:29 | -7 | 24 |
| 12 |
|
Torpedo Moskva | 20 | 4 | 8 | 8 | 22:29 | -7 | 20 |
| 13 |
|
Shinnik Yaroslavl | 21 | 4 | 7 | 10 | 19:28 | -9 | 19 |
| 14 |
|
FC Volgar-Gazprom | 20 | 3 | 9 | 8 | 14:24 | -10 | 18 |
| 15 |
|
Metallurg-Kuzbass Novokuznetsk | 21 | 5 | 3 | 13 | 11:26 | -15 | 18 |
| 16 |
|
FC Salyut Belgorod | 20 | 4 | 6 | 10 | 13:22 | -9 | 18 |
| 17 |
|
FK Khimki | 21 | 4 | 5 | 12 | 16:27 | -11 | 17 |
| Ascenso | |
| Permanencia | |
| Descenso |
