| 1. Jornada | 05.03.2006 | Kawasaki Frontale | - | Albirex Niigata | 6:0 | ||||
| 2. Jornada | 11.03.2006 | Albirex Niigata | - | FC Tokyo | 2:0 | ||||
| 3. Jornada | 18.03.2006 | RB Omiya Ardija | - | Albirex Niigata | 1:2 | ||||
| 4. Jornada | 21.03.2006 | Albirex Niigata | - | Júbilo Iwata | 0:2 |  |
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| 5. Jornada | 25.03.2006 | Cerezo Osaka | - | Albirex Niigata | 3:1 | ||||
| 17. Jornada | 12.08.2006 | Albirex Niigata | - | JEF United Chiba | 1:2 | ||||
| 18. Jornada | 19.08.2006 | Albirex Niigata | - | Kawasaki Frontale | 2:1 | |
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| 19. Jornada | 23.08.2006 | Urawa Red Diamonds | - | Albirex Niigata | 3:1 | ||||
| 20. Jornada | 26.08.2006 | Albirex Niigata | - | Oita Trinita | 3:3 | |
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| 21. Jornada | 30.08.2006 | Gamba Osaka | - | Albirex Niigata | 3:0 | ||||
| 22. Jornada | 09.09.2006 | Júbilo Iwata | - | Albirex Niigata | 7:0 | ||||
| 27. Jornada | 14.10.2006 | Albirex Niigata | - | Kyoto Purple Sanga | 1:1 | ||||
| 30. Jornada | 11.11.2006 | JEF United Chiba | - | Albirex Niigata | 1:3 | ||||
| 32. Jornada | 23.11.2006 | Kashima Antlers | - | Albirex Niigata | 5:1 |  |
Japón