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| 10.04.2009 | 16:00 | Krylia Sovetov | - | FK Khimki | 3:0 (1:0) | |
| 11.04.2009 | 12:00 | FK Moskva | - | Spartak Moskva | 3:1 (2:0) | |
| 12:45 | Terek Grozny | - | Rubin Kazan | 1:2 (0:2) | ||
| 15:00 | Dinamo Moskva | - | FK Rostov | 1:0 (0:0) | ||
| 17:15 | Kuban Krasnodar (1928-2018) | - | FK Tom Tomsk | 0:0 (0:0) | ||
| 12.04.2009 | 12:00 | CSKA Moscú | - | Lokomotiv Moskva | 4:1 (1:0) | |
| 14:30 | Zenit | - | FK Amkar Perm | 0:0 (0:0) | ||
| 17:00 | Spartak Nalchik | - | FK Saturn | 1:1 (0:0) |
| » Clasificación | En casa | Fuera de casa | 1.ª vuelta | 2.ª vuelta |
| # | Equipo | P | V | E | D | Goles | DG | Pun. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Krylia Sovetov | 4 | 3 | 0 | 1 | 6:2 | 4 | 9 |
| 2 |
|
Dinamo Moskva | 4 | 3 | 0 | 1 | 5:3 | 2 | 9 |
| 3 |
|
Zenit | 4 | 2 | 2 | 0 | 6:2 | 4 | 8 |
| 4 |
|
Rubin Kazan | 4 | 2 | 2 | 0 | 5:1 | 4 | 8 |
| 5 |
|
CSKA Moscú | 4 | 2 | 1 | 1 | 7:2 | 5 | 7 |
| 6 |
|
Terek Grozny | 4 | 2 | 1 | 1 | 3:2 | 1 | 7 |
| 7 |
|
FK Moskva | 4 | 1 | 2 | 1 | 3:2 | 1 | 5 |
| 8 |
|
FK Rostov | 4 | 1 | 2 | 1 | 2:2 | 0 | 5 |
| 9 |
|
Lokomotiv Moskva | 4 | 1 | 2 | 1 | 5:7 | -2 | 5 |
| 10 |
|
Spartak Moskva | 4 | 1 | 1 | 2 | 4:5 | -1 | 4 |
| 11 |
|
FK Saturn | 4 | 1 | 1 | 2 | 4:7 | -3 | 4 |
| 12 |
|
Kuban Krasnodar (1928-2018) | 4 | 1 | 1 | 2 | 2:5 | -3 | 4 |
| 13 |
|
FK Tom Tomsk | 4 | 1 | 1 | 2 | 1:4 | -3 | 4 |
| 14 |
|
FK Amkar Perm | 4 | 0 | 3 | 1 | 0:1 | -1 | 3 |
| 15 |
|
Spartak Nalchik | 4 | 0 | 2 | 2 | 1:4 | -3 | 2 |
| 16 |
|
FK Khimki | 4 | 0 | 1 | 3 | 3:8 | -5 | 1 |
| Champions League | |
| CL Ronda previa | |
| Europa League | |
| Descenso |
