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| Clasificación | En casa | Fuera de casa | 1.ª vuelta | 2.ª vuelta | 1.ª parte | » 2.ª parte |
| # | Equipo | P | V | E | D | Goles | DG | Pun. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
1. FC Nürnberg | 24 | 12 | 8 | 4 | 21:9 | 12 | 44 |
| 2 |
|
FC St. Pauli | 24 | 10 | 10 | 4 | 19:15 | 4 | 40 |
| 3 |
|
SC Freiburg | 24 | 11 | 6 | 7 | 19:16 | 3 | 39 |
| 4 |
|
VfB Leipzig | 24 | 10 | 6 | 8 | 16:19 | -3 | 36 |
| 5 |
|
Fortuna Köln | 24 | 8 | 10 | 6 | 23:23 | 0 | 34 |
| 6 |
|
Mainz | 24 | 8 | 8 | 8 | 22:18 | 4 | 32 |
| 7 |
|
SpVgg Unterhaching | 24 | 8 | 8 | 8 | 16:13 | 3 | 32 |
| 8 |
|
SpVgg Greuther Fürth | 24 | 6 | 13 | 5 | 15:12 | 3 | 31 |
| 9 |
|
SG Wattenscheid 09 | 24 | 7 | 10 | 7 | 14:12 | 2 | 31 |
| 10 |
|
Energie Cottbus | 24 | 6 | 13 | 5 | 12:11 | 1 | 31 |
| 11 |
|
Fortuna Düsseldorf | 24 | 7 | 8 | 9 | 23:22 | 1 | 29 |
| 12 |
|
Eintracht Frankfurt | 24 | 5 | 13 | 6 | 15:15 | 0 | 28 |
| 13 |
|
FC Carl Zeiss Jena | 24 | 7 | 7 | 10 | 14:18 | -4 | 28 |
| 14 |
|
FC Gütersloh | 24 | 5 | 12 | 7 | 14:13 | 1 | 27 |
| 15 |
|
FSV Zwickau | 24 | 5 | 11 | 8 | 13:20 | -7 | 26 |
| 16 |
|
Stuttgarter Kickers | 24 | 6 | 8 | 10 | 15:25 | -10 | 26 |
| 17 |
|
KFC Uerdingen 05 | 24 | 4 | 13 | 7 | 11:14 | -3 | 25 |
| 18 |
|
SV Meppen | 24 | 5 | 8 | 11 | 19:26 | -7 | 23 |
