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| Clasificación | En casa | Fuera de casa | 1.ª vuelta | 2.ª vuelta | 1.ª parte | » 2.ª parte |
| # | Equipo | P | V | E | D | Goles | DG | Pun. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
1. FC Nürnberg | 31 | 16 | 10 | 5 | 28:13 | 15 | 58 |
| 2 |
|
SC Freiburg | 31 | 14 | 8 | 9 | 27:21 | 6 | 50 |
| 3 |
|
FC St. Pauli | 31 | 11 | 15 | 5 | 20:16 | 4 | 48 |
| 4 |
|
Fortuna Köln | 31 | 11 | 12 | 8 | 29:29 | 0 | 45 |
| 5 |
|
SpVgg Greuther Fürth | 31 | 9 | 17 | 5 | 22:15 | 7 | 44 |
| 6 |
|
VfB Leipzig | 31 | 11 | 10 | 10 | 18:23 | -5 | 43 |
| 7 |
|
SG Wattenscheid 09 | 31 | 10 | 12 | 9 | 23:16 | 7 | 42 |
| 8 |
|
SpVgg Unterhaching | 31 | 11 | 9 | 11 | 25:20 | 5 | 42 |
| 9 |
|
Eintracht Frankfurt | 31 | 8 | 16 | 7 | 21:18 | 3 | 40 |
| 10 |
|
Energie Cottbus | 31 | 8 | 16 | 7 | 15:13 | 2 | 40 |
| 11 |
|
Mainz | 31 | 10 | 10 | 11 | 26:25 | 1 | 40 |
| 12 |
|
FC Gütersloh | 31 | 7 | 17 | 7 | 19:15 | 4 | 38 |
| 13 |
|
Stuttgarter Kickers | 31 | 8 | 12 | 11 | 19:28 | -9 | 36 |
| 14 |
|
KFC Uerdingen 05 | 31 | 6 | 16 | 9 | 20:22 | -2 | 34 |
| 15 |
|
Fortuna Düsseldorf | 31 | 8 | 10 | 13 | 27:32 | -5 | 34 |
| 16 |
|
FSV Zwickau | 31 | 7 | 13 | 11 | 19:24 | -5 | 34 |
| 17 |
|
FC Carl Zeiss Jena | 31 | 9 | 7 | 15 | 16:29 | -13 | 34 |
| 18 |
|
SV Meppen | 31 | 5 | 10 | 16 | 21:36 | -15 | 25 |
