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| Clasificación | En casa | Fuera de casa | 1.ª vuelta | 2.ª vuelta | » 1.ª parte | 2.ª parte |
| # | Equipo | P | V | E | D | Goles | DG | Pun. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
FC Gütersloh | 32 | 14 | 16 | 2 | 21:8 | 13 | 58 |
| 2 |
|
Eintracht Frankfurt | 32 | 15 | 12 | 5 | 24:9 | 15 | 57 |
| 3 |
|
SC Freiburg | 32 | 13 | 12 | 7 | 24:13 | 11 | 51 |
| 4 |
|
Stuttgarter Kickers | 32 | 10 | 18 | 4 | 23:15 | 8 | 48 |
| 5 |
|
FC St. Pauli | 32 | 10 | 17 | 5 | 15:13 | 2 | 47 |
| 6 |
|
Fortuna Köln | 32 | 9 | 16 | 7 | 21:17 | 4 | 43 |
| 7 |
|
1. FC Nürnberg | 32 | 9 | 16 | 7 | 18:16 | 2 | 43 |
| 8 |
|
SpVgg Unterhaching | 32 | 8 | 18 | 6 | 15:11 | 4 | 42 |
| 9 |
|
Fortuna Düsseldorf | 32 | 10 | 12 | 10 | 19:19 | 0 | 42 |
| 10 |
|
KFC Uerdingen 05 | 32 | 8 | 15 | 9 | 13:13 | 0 | 39 |
| 11 |
|
Energie Cottbus | 32 | 8 | 15 | 9 | 17:18 | -1 | 39 |
| 12 |
|
Mainz | 32 | 8 | 14 | 10 | 22:22 | 0 | 38 |
| 13 |
|
SG Wattenscheid 09 | 32 | 9 | 11 | 12 | 15:19 | -4 | 38 |
| 14 |
|
SpVgg Greuther Fürth | 32 | 6 | 20 | 6 | 9:14 | -5 | 38 |
| 15 |
|
FC Carl Zeiss Jena | 32 | 7 | 12 | 13 | 16:26 | -10 | 33 |
| 16 |
|
VfB Leipzig | 32 | 4 | 16 | 12 | 13:25 | -12 | 28 |
| 17 |
|
SV Meppen | 32 | 3 | 15 | 14 | 11:19 | -8 | 24 |
| 18 |
|
FSV Zwickau | 32 | 2 | 15 | 15 | 8:27 | -19 | 21 |
