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| Clasificación | En casa | Fuera de casa | 1.ª vuelta | 2.ª vuelta | 1.ª parte | » 2.ª parte |
| # | Equipo | P | V | E | D | Goles | DG | Pun. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
VfL Bochum | 31 | 17 | 8 | 6 | 31:13 | 18 | 59 |
| 2 |
|
Energie Cottbus | 31 | 16 | 10 | 5 | 32:16 | 16 | 58 |
| 3 |
|
Alemannia Aachen | 31 | 14 | 13 | 4 | 34:17 | 17 | 55 |
| 4 |
|
SC Freiburg | 31 | 11 | 14 | 6 | 25:17 | 8 | 47 |
| 5 |
|
SpVgg Greuther Fürth | 31 | 11 | 13 | 7 | 24:19 | 5 | 46 |
| 6 |
|
Karlsruher SC | 31 | 11 | 11 | 9 | 25:22 | 3 | 44 |
| 7 |
|
Wacker Burghausen | 31 | 9 | 16 | 6 | 18:19 | -1 | 43 |
| 8 |
|
SC Paderborn 07 | 31 | 8 | 17 | 6 | 17:16 | 1 | 41 |
| 9 |
|
Kickers Offenbach | 31 | 10 | 11 | 10 | 24:30 | -6 | 41 |
| 10 |
|
SpVgg Unterhaching | 31 | 9 | 11 | 11 | 19:24 | -5 | 38 |
| 11 |
|
Hansa Rostock | 31 | 8 | 13 | 10 | 21:22 | -1 | 37 |
| 12 |
|
LR Ahlen | 31 | 8 | 10 | 13 | 18:23 | -5 | 34 |
| 13 |
|
Eintracht Braunschweig | 31 | 7 | 12 | 12 | 17:20 | -3 | 33 |
| 14 |
|
1. FC Saarbrücken | 31 | 7 | 12 | 12 | 18:32 | -14 | 33 |
| 15 |
|
Erzgebirge Aue | 31 | 7 | 11 | 13 | 15:24 | -9 | 32 |
| 16 |
|
Dynamo Dresden | 31 | 7 | 10 | 14 | 14:23 | -9 | 31 |
| 17 |
|
TSV 1860 München | 31 | 6 | 12 | 13 | 18:23 | -5 | 30 |
| 18 |
|
Sportfreunde Siegen | 31 | 6 | 10 | 15 | 17:27 | -10 | 28 |
