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| Clasificación | En casa | Fuera de casa | 1.ª vuelta | 2.ª vuelta | » 1.ª parte | 2.ª parte |
| # | Equipo | P | V | E | D | Goles | DG | Pun. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
SpVgg Greuther Fürth | 20 | 11 | 6 | 3 | 16:5 | 11 | 39 |
| 2 |
|
Eintracht Frankfurt | 20 | 11 | 4 | 5 | 19:9 | 10 | 37 |
| 3 |
|
TSV 1860 München | 20 | 11 | 3 | 6 | 19:13 | 6 | 36 |
| 4 |
|
1. FC Union Berlin | 20 | 9 | 7 | 4 | 15:13 | 2 | 34 |
| 5 |
|
SC Paderborn 07 | 20 | 8 | 9 | 3 | 12:6 | 6 | 33 |
| 6 |
|
Dynamo Dresden | 20 | 8 | 8 | 4 | 17:11 | 6 | 32 |
| 7 |
|
FC St. Pauli | 20 | 8 | 8 | 4 | 15:9 | 6 | 32 |
| 8 |
|
Fortuna Düsseldorf | 20 | 8 | 7 | 5 | 17:10 | 7 | 31 |
| 9 |
|
VfL Bochum | 20 | 7 | 8 | 5 | 15:12 | 3 | 29 |
| 10 |
|
Eintracht Braunschweig | 20 | 8 | 4 | 8 | 15:13 | 2 | 28 |
| 11 |
|
Alemannia Aachen | 20 | 6 | 9 | 5 | 11:10 | 1 | 27 |
| 12 |
|
Energie Cottbus | 20 | 5 | 7 | 8 | 7:16 | -9 | 22 |
| 13 |
|
Ingolstadt | 20 | 4 | 8 | 8 | 11:16 | -5 | 20 |
| 14 |
|
FSV Frankfurt | 20 | 4 | 7 | 9 | 7:16 | -9 | 19 |
| 15 |
|
MSV Duisburg | 20 | 3 | 8 | 9 | 10:15 | -5 | 17 |
| 16 |
|
Hansa Rostock | 20 | 2 | 10 | 8 | 4:10 | -6 | 16 |
| 17 |
|
Erzgebirge Aue | 20 | 0 | 12 | 8 | 5:17 | -12 | 12 |
| 18 |
|
Karlsruher SC | 20 | 2 | 5 | 13 | 11:25 | -14 | 11 |
| Ascenso | |
| Permanencia | |
| Permanencia | |
| Descenso |
