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| Clasificación | En casa | Fuera de casa | 1.ª vuelta | 2.ª vuelta | » 1.ª parte | 2.ª parte |
| # | Equipo | P | V | E | D | Goles | DG | Pun. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
SpVgg Unterhaching | 25 | 15 | 9 | 1 | 32:3 | 29 | 54 |
| 2 |
|
FC Memmingen | 25 | 13 | 8 | 4 | 26:12 | 14 | 47 |
| 3 |
|
Augsburgo II | 25 | 12 | 7 | 6 | 24:12 | 12 | 43 |
| 4 |
|
Bayern Múnich II | 25 | 9 | 11 | 5 | 16:9 | 7 | 38 |
| 5 |
|
1. FC Schweinfurt 05 | 25 | 10 | 8 | 7 | 21:17 | 4 | 38 |
| 6 |
|
Wacker Burghausen | 25 | 9 | 10 | 6 | 16:13 | 3 | 37 |
| 7 |
|
FV Illertissen | 25 | 9 | 8 | 8 | 17:17 | 0 | 35 |
| 8 |
|
SpVgg Bayreuth | 25 | 8 | 8 | 9 | 18:21 | -3 | 32 |
| 9 |
|
1. FC Nürnberg II | 25 | 7 | 10 | 8 | 23:22 | 1 | 31 |
| 10 |
|
TSV 1860 München II | 25 | 7 | 10 | 8 | 12:12 | 0 | 31 |
| 11 |
|
SpVgg Greuther Fürth II | 25 | 6 | 12 | 7 | 17:16 | 1 | 30 |
| 12 |
|
Ingolstadt II | 25 | 7 | 9 | 9 | 12:16 | -4 | 30 |
| 13 |
|
SV Seligenporten | 25 | 6 | 12 | 7 | 15:21 | -6 | 30 |
| 14 |
|
TSV 1860 Rosenheim | 25 | 5 | 14 | 6 | 8:11 | -3 | 29 |
| 15 |
|
SV Schalding-Heining | 25 | 6 | 11 | 8 | 13:18 | -5 | 29 |
| 16 |
|
VfR Garching | 25 | 6 | 6 | 13 | 15:29 | -14 | 24 |
| 17 |
|
TSV Buchbach | 25 | 4 | 7 | 14 | 12:28 | -16 | 19 |
| 18 |
|
SpVgg Bayern Hof | 25 | 3 | 6 | 16 | 12:32 | -20 | 15 |
| Playoff | |
| Permanencia | |
| Descenso |
