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| Clasificación | En casa | Fuera de casa | 1.ª vuelta | 2.ª vuelta | 1.ª parte | » 2.ª parte |
| # | Equipo | P | V | E | D | Goles | DG | Pun. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
VfL Bochum | 33 | 18 | 8 | 7 | 33:15 | 18 | 62 |
| 2 |
|
Alemannia Aachen | 33 | 15 | 14 | 4 | 35:17 | 18 | 59 |
| 3 |
|
Energie Cottbus | 33 | 16 | 11 | 6 | 32:17 | 15 | 59 |
| 4 |
|
Karlsruher SC | 33 | 13 | 11 | 9 | 31:23 | 8 | 50 |
| 5 |
|
SpVgg Greuther Fürth | 33 | 12 | 14 | 7 | 25:19 | 6 | 50 |
| 6 |
|
SC Freiburg | 33 | 11 | 16 | 6 | 25:17 | 8 | 49 |
| 7 |
|
Kickers Offenbach | 33 | 12 | 11 | 10 | 27:30 | -3 | 47 |
| 8 |
|
Wacker Burghausen | 33 | 10 | 16 | 7 | 22:21 | 1 | 46 |
| 9 |
|
SC Paderborn 07 | 33 | 8 | 17 | 8 | 17:20 | -3 | 41 |
| 10 |
|
SpVgg Unterhaching | 33 | 10 | 11 | 12 | 20:26 | -6 | 41 |
| 11 |
|
Hansa Rostock | 33 | 8 | 15 | 10 | 21:22 | -1 | 39 |
| 12 |
|
Eintracht Braunschweig | 33 | 8 | 12 | 13 | 19:24 | -5 | 36 |
| 13 |
|
LR Ahlen | 33 | 8 | 11 | 14 | 19:25 | -6 | 35 |
| 14 |
|
Erzgebirge Aue | 33 | 8 | 11 | 14 | 16:25 | -9 | 35 |
| 15 |
|
1. FC Saarbrücken | 33 | 7 | 13 | 13 | 18:34 | -16 | 34 |
| 16 |
|
Dynamo Dresden | 33 | 7 | 12 | 14 | 15:24 | -9 | 33 |
| 17 |
|
TSV 1860 München | 33 | 6 | 13 | 14 | 18:24 | -6 | 31 |
| 18 |
|
Sportfreunde Siegen | 33 | 7 | 10 | 16 | 19:29 | -10 | 31 |
