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| 02.09.2006 | 13:30 | 1. FC Nürnberg II | - | TSV Aindling | 2:0 (2:0) | |
| 14:00 | VfL Frohnlach | - | FC Memmingen | 0:1 (0:0) | ||
| 15:00 | Jahn Regensburg | - | TSV Großbardorf | 1:0 (0:0) | ||
| 15:00 | SpVgg Unterhaching II | - | SpVgg Greuther Fürth II | 0:0 (0:0) | ||
| 15:00 | SpVgg Bayern Hof | - | SpVgg Weiden | 2:0 (0:0) | ||
| 15:00 | Wacker Burghausen II | - | 1. FC Bad Kötzting | 1:3 (1:0) | ||
| 16:00 | SpVgg Bayreuth | - | 1. SC Feucht | 2:0 (1:0) | ||
| 17:00 | FC Ismaning | - | SV Heimstetten | 1:1 (0:0) | ||
| 03.09.2006 | 18:00 | SC Fürstenfeldbruck | - | 1. FC Eintracht Bamberg | 2:3 (1:1) |
| » Clasificación | En casa | Fuera de casa | 1.ª vuelta | 2.ª vuelta |
| # | Equipo | P | V | E | D | Goles | DG | Pun. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
1. FC Eintracht Bamberg | 9 | 6 | 3 | 0 | 16:8 | 8 | 21 |
| 2 |
|
SpVgg Greuther Fürth II | 9 | 5 | 3 | 1 | 21:8 | 13 | 18 |
| 3 |
|
SpVgg Unterhaching II | 8 | 5 | 3 | 0 | 12:1 | 11 | 18 |
| 4 |
|
Jahn Regensburg | 8 | 5 | 2 | 1 | 14:9 | 5 | 17 |
| 5 |
|
SpVgg Bayreuth | 9 | 4 | 4 | 1 | 9:5 | 4 | 16 |
| 6 |
|
SpVgg Weiden | 9 | 4 | 3 | 2 | 9:9 | 0 | 15 |
| 7 |
|
Würzburger FV | 8 | 4 | 2 | 2 | 13:7 | 6 | 14 |
| 8 |
|
1. FC Bad Kötzting | 9 | 3 | 4 | 2 | 15:11 | 4 | 13 |
| 9 |
|
1. FC Nürnberg II | 9 | 3 | 3 | 3 | 11:10 | 1 | 12 |
| 10 |
|
TSV Großbardorf | 9 | 3 | 2 | 4 | 14:17 | -3 | 11 |
| 11 |
|
TSV Aindling | 8 | 3 | 1 | 4 | 10:12 | -2 | 10 |
| 12 |
|
FC Memmingen | 8 | 3 | 1 | 4 | 8:10 | -2 | 10 |
| 13 |
|
SV Heimstetten | 8 | 3 | 1 | 4 | 9:12 | -3 | 10 |
| 14 |
|
SC Fürstenfeldbruck | 9 | 2 | 3 | 4 | 11:15 | -4 | 9 |
| 15 |
|
SpVgg Bayern Hof | 8 | 2 | 2 | 4 | 8:11 | -3 | 8 |
| 16 |
|
VfL Frohnlach | 9 | 1 | 3 | 5 | 8:12 | -4 | 6 |
| 17 |
|
FC Ismaning | 9 | 1 | 3 | 5 | 7:15 | -8 | 6 |
| 18 |
|
1. SC Feucht | 8 | 1 | 0 | 7 | 8:16 | -8 | 3 |
| 19 |
|
Wacker Burghausen II | 8 | 0 | 3 | 5 | 6:21 | -15 | 3 |
