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| 05.08.2016 | 18:30 | SpVgg Bayern Hof | - | TSV 1860 Rosenheim | 0:1 (0:0) | |
| 18:30 | 1. FC Nürnberg II | - | FV Illertissen | 1:2 (0:1) | ||
| 18:30 | SV Schalding-Heining | - | Wacker Burghausen | 1:1 (0:0) | ||
| 19:00 | Augsburgo II | - | TSV Buchbach | 2:0 (1:0) | ||
| 19:00 | 1. FC Schweinfurt 05 | - | SV Seligenporten | 1:0 (0:0) | ||
| 19:30 | FC Memmingen | - | SpVgg Bayreuth | 2:2 (2:2) | ||
| 06.08.2016 | 14:00 | SpVgg Greuther Fürth II | - | Ingolstadt II | 3:3 (1:1) | |
| 17:00 | VfR Garching | - | TSV 1860 München II | 1:2 (0:1) | ||
| 20.09.2016 | 19:00 | Bayern Múnich II | - | SpVgg Unterhaching | 2:2 (0:0) |
| » Clasificación | En casa | Fuera de casa | 1.ª vuelta | 2.ª vuelta | 1.ª parte | 2.ª parte |
| # | Equipo | P | V | E | D | Goles | DG | Pun. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
SpVgg Unterhaching | 5 | 4 | 1 | 0 | 14:5 | 9 | 13 |
| 2 |
|
Augsburgo II | 5 | 3 | 2 | 0 | 20:5 | 15 | 11 |
| 3 |
|
Bayern Múnich II | 5 | 3 | 2 | 0 | 11:7 | 4 | 11 |
| 4 |
|
SpVgg Bayreuth | 5 | 2 | 2 | 1 | 11:10 | 1 | 8 |
| 5 |
|
1. FC Nürnberg II | 5 | 2 | 2 | 1 | 9:8 | 1 | 8 |
| 6 |
|
SV Schalding-Heining | 5 | 1 | 4 | 0 | 10:5 | 5 | 7 |
| 7 |
|
FC Memmingen | 5 | 2 | 1 | 2 | 11:7 | 4 | 7 |
| 8 |
|
FV Illertissen | 5 | 2 | 1 | 2 | 8:6 | 2 | 7 |
| 9 |
|
1. FC Schweinfurt 05 | 5 | 2 | 1 | 2 | 7:9 | -2 | 7 |
| 10 |
|
Wacker Burghausen | 5 | 1 | 3 | 1 | 6:8 | -2 | 6 |
| 11 |
|
VfR Garching | 5 | 2 | 0 | 3 | 9:12 | -3 | 6 |
| 12 |
|
SpVgg Greuther Fürth II | 5 | 1 | 2 | 2 | 7:7 | 0 | 5 |
| 13 |
|
Ingolstadt II | 5 | 1 | 1 | 3 | 9:13 | -4 | 4 |
| 14 |
|
TSV Buchbach | 5 | 1 | 1 | 3 | 5:9 | -4 | 4 |
| 15 |
|
TSV 1860 Rosenheim | 5 | 1 | 1 | 3 | 3:7 | -4 | 4 |
| 16 |
|
SpVgg Bayern Hof | 5 | 1 | 0 | 4 | 10:13 | -3 | 3 |
| 17 |
|
SV Seligenporten | 5 | 0 | 0 | 5 | 2:24 | -22 | 0 |
| 18 |
|
TSV 1860 München II | 5 | 4 | 0 | 1 | 0:0 | -7 | -51 |
| Playoff | |
| Permanencia | |
| Descenso |
