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| 02.09.2016 | 18:00 | SpVgg Bayern Hof | - | FC Memmingen | 1:3 (0:2) | |
| 18:30 | FV Illertissen | - | TSV Buchbach | 2:2 (1:1) | ||
| 19:00 | SV Seligenporten | - | Wacker Burghausen | 4:3 (3:0) | ||
| 19:00 | Bayern Múnich II | - | TSV 1860 Rosenheim | 2:1 (1:0) | ||
| 19:00 | 1. FC Schweinfurt 05 | - | Ingolstadt II | 2:2 (1:0) | ||
| 03.09.2016 | 14:00 | SpVgg Greuther Fürth II | - | VfR Garching | 4:2 (4:0) | |
| 14:00 | 1. FC Nürnberg II | - | SpVgg Unterhaching | 1:4 (1:2) | ||
| 14:00 | SV Schalding-Heining | - | SpVgg Bayreuth | 2:3 (2:1) | ||
| 19.10.2016 | 18:00 | Augsburgo II | - | TSV 1860 München II | 1:0 (0:0) |
| » Clasificación | En casa | Fuera de casa | 1.ª vuelta | 2.ª vuelta | 1.ª parte | 2.ª parte |
| # | Equipo | P | V | E | D | Goles | DG | Pun. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
SpVgg Unterhaching | 9 | 8 | 1 | 0 | 27:7 | 20 | 25 |
| 2 |
|
Bayern Múnich II | 9 | 5 | 4 | 0 | 16:9 | 7 | 19 |
| 3 |
|
Augsburgo II | 9 | 4 | 4 | 1 | 23:9 | 14 | 16 |
| 4 |
|
FV Illertissen | 9 | 4 | 2 | 3 | 15:10 | 5 | 14 |
| 5 |
|
1. FC Nürnberg II | 9 | 4 | 2 | 3 | 20:17 | 3 | 14 |
| 6 |
|
1. FC Schweinfurt 05 | 9 | 4 | 2 | 3 | 14:17 | -3 | 14 |
| 7 |
|
VfR Garching | 9 | 4 | 1 | 4 | 17:18 | -1 | 13 |
| 8 |
|
FC Memmingen | 9 | 3 | 3 | 3 | 17:12 | 5 | 12 |
| 9 |
|
SpVgg Bayreuth | 9 | 3 | 3 | 3 | 15:17 | -2 | 12 |
| 10 |
|
SpVgg Greuther Fürth II | 9 | 3 | 2 | 4 | 14:12 | 2 | 11 |
| 11 |
|
TSV 1860 Rosenheim | 9 | 3 | 1 | 5 | 6:11 | -5 | 10 |
| 12 |
|
Wacker Burghausen | 9 | 2 | 3 | 4 | 13:18 | -5 | 9 |
| 13 |
|
SV Seligenporten | 9 | 3 | 0 | 6 | 13:32 | -19 | 9 |
| 14 |
|
SV Schalding-Heining | 9 | 1 | 5 | 3 | 13:14 | -1 | 8 |
| 15 |
|
Ingolstadt II | 9 | 1 | 5 | 3 | 13:17 | -4 | 8 |
| 16 |
|
TSV Buchbach | 9 | 2 | 2 | 5 | 13:18 | -5 | 8 |
| 17 |
|
SpVgg Bayern Hof | 9 | 1 | 0 | 8 | 12:26 | -14 | 3 |
| 18 |
|
TSV 1860 München II | 9 | 5 | 2 | 2 | 0:0 | -7 | -46 |
| Playoff | |
| Permanencia | |
| Descenso |
